Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | SCC1_RS16900 | Not Available | Negative | 3757849 - 3758637 | 30014.9 |
| yqcc family protein | SCC1_RS16905 | Not Available | Negative | 3758630 - 3758980 | 13325.7 |
| secy-interacting protein | SCC1_RS16910 | Not Available | Negative | 3759802 - 3760350 | 20226.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | SCC1_RS16915 | Not Available | Positive | 3760421 - 3761269 | 32320.0 |
| nucleotide 5'-monophosphate nucleosidase ppnn | SCC1_RS16920 | Not Available | Positive | 3761588 - 3762952 | 50442.9 |
| flap endonuclease xni | SCC1_RS16925 | Not Available | Positive | 3763024 - 3763806 | 28759.4 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | SCC1_RS16930 | Not Available | Negative | 3763860 - 3764960 | 42078.8 |
| duf423 domain-containing protein | SCC1_RS16935 | Not Available | Negative | 3764953 - 3765348 | 14525.1 |
| transcriptional regulator gcva | SCC1_RS16940 | Not Available | Negative | 3765604 - 3766527 | 34576.4 |
| ygdi/ygdr family lipoprotein | SCC1_RS16945 | Not Available | Negative | 3767065 - 3767286 | 8032.62 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

