Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | SCC1_RS16390 | Not Available | Positive | 3626299 - 3628164 | 67671.4 |
| phosphatidylglycerophosphatase a | SCC1_RS16395 | Not Available | Negative | 3628236 - 3628772 | 20013.8 |
| thiamine-phosphate kinase | SCC1_RS16400 | Not Available | Negative | 3628747 - 3629727 | 35689.3 |
| transcription antitermination factor nusb | SCC1_RS16405 | Not Available | Negative | 3629796 - 3630215 | 15734.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | SCC1_RS16410 | Not Available | Negative | 3630240 - 3630716 | 16466.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | SCC1_RS16415 | Not Available | Negative | 3630828 - 3631964 | 41158.5 |
| transcriptional regulator nrdr | SCC1_RS16420 | Not Available | Negative | 3632000 - 3632449 | 17230.9 |
| duf3251 domain-containing protein | SCC1_RS16425 | Not Available | Positive | 3632667 - 3633236 | 20448.6 |
| is4 family transposase | SCC1_RS16435 | Not Available | Negative | 3633433 - 3634626 | 45491.4 |
| protein translocase subunit secf | SCC1_RS16440 | Not Available | Negative | 3634756 - 3635667 | 32924.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

