Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypc/hybg/hupf family hydrogenase formation chaperone | SCC1_RS15830 | Not Available | Positive | 3501239 - 3501517 | 10137.2 |
| hydrogenase formation protein hypd | SCC1_RS15835 | Not Available | Positive | 3501517 - 3502638 | 41387.9 |
| hydrogenase expression/formation protein hype | SCC1_RS15840 | Not Available | Positive | 3502635 - 3503645 | 35418.8 |
| hydrogenase-2 assembly chaperone | SCC1_RS15845 | Not Available | Negative | 3503744 - 3504217 | 17163.0 |
| hyad/hybd family hydrogenase maturation endopeptidase | SCC1_RS15850 | Not Available | Negative | 3504207 - 3504701 | 17392.2 |
| hydrogenase 2 large subunit | SCC1_RS15855 | Not Available | Negative | 3504701 - 3506395 | 62492.0 |
| ni/fe-hydrogenase cytochrome b subunit | SCC1_RS15860 | Not Available | Negative | 3506373 - 3507572 | 44679.8 |
| hydrogenase 2 operon protein hyba | SCC1_RS15865 | Not Available | Negative | 3507559 - 3508572 | 37260.4 |
| hydrogenase 2 small subunit | SCC1_RS15870 | Not Available | Negative | 3508576 - 3509691 | 39877.7 |
| putative abc transporter permease subunit ybbp | SCC1_RS15880 | Not Available | Negative | 3510419 - 3512848 | 89945.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

