Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-oxoprolinase subunit pxpa | SCC1_RS15220 | Not Available | Negative | 3371892 - 3372629 | 26199.7 |
| 5-oxoprolinase subunit pxpc | SCC1_RS15225 | Not Available | Negative | 3372619 - 3373563 | 34465.6 |
| 5-oxoprolinase subunit pxpb | SCC1_RS15230 | Not Available | Negative | 3373557 - 3374213 | 23954.0 |
| type 2 gtp cyclohydrolase i | SCC1_RS15235 | Not Available | Negative | 3374370 - 3375113 | 27155.5 |
| deoxyribodipyrimidine photo-lyase | SCC1_RS15240 | Not Available | Negative | 3375106 - 3376599 | 57414.9 |
| ybga family protein | SCC1_RS15245 | Not Available | Negative | 3376621 - 3377580 | 36897.8 |
| abc transporter atp-binding protein | SCC1_RS15250 | Not Available | Positive | 3377990 - 3378682 | 25044.4 |
| abc transporter substrate-binding protein | SCC1_RS15255 | Not Available | Positive | 3378700 - 3379680 | 34948.0 |
| abc transporter permease | SCC1_RS15260 | Not Available | Positive | 3379773 - 3381428 | 58527.4 |
| ybfa family protein | SCC1_RS15265 | Not Available | Negative | 3381599 - 3381805 | 8006.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

