Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SCC1_RS14365 | Not Available | Positive | 3176410 - 3176622 | 8429.09 |
| putative zinc ribbon protein | SCC1_RS14370 | Not Available | Positive | 3176715 - 3177137 | 16388.4 |
| hypothetical protein | SCC1_RS14375 | Not Available | Positive | 3177293 - 3177874 | 22468.1 |
| hcp family type vi secretion system effector | SCC1_RS14380 | Not Available | Positive | 3178195 - 3178713 | 19065.5 |
| type vi secretion system tip protein vgrg | SCC1_RS14385 | Not Available | Positive | 3178833 - 3180662 | 66945.4 |
| duf1795 domain-containing protein | SCC1_RS14390 | Not Available | Positive | 3180691 - 3181134 | 16123.0 |
| rhs repeat-associated core domain-containing protein | SCC1_RS14395 | Not Available | Positive | 3181127 - 3185383 | 158857.0 |
| hypothetical protein | SCC1_RS14400 | Not Available | Positive | 3185413 - 3185700 | 11091.9 |
| hypothetical protein | SCC1_RS22575 | Not Available | Negative | 3185787 - 3185936 | 4988.98 |
| dna/rna non-specific endonuclease | SCC1_RS14405 | Not Available | Positive | 3186212 - 3186568 | 12894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

