Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | SCC1_RS13000 | Not Available | Negative | 2896116 - 2896799 | 26325.5 |
| mlic family protein | SCC1_RS13005 | Not Available | Negative | 2896907 - 2897224 | 11591.0 |
| anhydro-n-acetylmuramic acid kinase | SCC1_RS13010 | Not Available | Negative | 2897321 - 2898433 | 39410.8 |
| glycine zipper 2tm domain-containing protein | SCC1_RS13015 | Not Available | Positive | 2898783 - 2899250 | 15474.6 |
| transcriptional regulator slya | SCC1_RS13020 | Not Available | Negative | 2899382 - 2899819 | 16418.1 |
| duf1289 domain-containing protein | SCC1_RS13025 | Not Available | Negative | 2900048 - 2900287 | 9214.94 |
| lactoylglutathione lyase | SCC1_RS13030 | Not Available | Positive | 2900578 - 2900985 | 14815.5 |
| ribonuclease t | SCC1_RS13035 | Not Available | Positive | 2901133 - 2901804 | 24224.6 |
| grx4 family monothiol glutaredoxin | SCC1_RS13040 | Not Available | Negative | 2901909 - 2902259 | 13078.8 |
| c40 family peptidase | SCC1_RS13045 | Not Available | Positive | 2902600 - 2903451 | 31450.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

