Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein | SCC1_RS12245 | Not Available | Positive | 2713045 - 2713482 | 17186.2 |
| type iii secretion system hrpp c-terminal domain-containing protein | SCC1_RS12250 | Not Available | Positive | 2713479 - 2714012 | 19931.0 |
| type iii secretion system cytoplasmic ring protein sctq | SCC1_RS12255 | Not Available | Positive | 2714009 - 2715148 | 41569.6 |
| type iii secretion system export apparatus subunit sctr | SCC1_RS12260 | Not Available | Positive | 2715145 - 2715798 | 24037.5 |
| type iii secretion system export apparatus subunit scts | SCC1_RS12265 | Not Available | Positive | 2715806 - 2716066 | 9229.07 |
| type iii secretion system export apparatus subunit sctt | SCC1_RS12270 | Not Available | Positive | 2716073 - 2716876 | 29298.3 |
| type iii secretion system export apparatus subunit sctu | SCC1_RS12275 | Not Available | Positive | 2716887 - 2717966 | 40537.8 |
| duf2931 family protein | SCC1_RS12280 | Not Available | Negative | 2718098 - 2718799 | 26265.4 |
| t6ss phospholipase effector tle1-like catalytic domain-containing protein | SCC1_RS12285 | Not Available | Negative | 2718796 - 2720790 | 73800.6 |
| lysr family transcriptional regulator | SCC1_RS12290 | Not Available | Negative | 2721414 - 2722346 | 34620.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

