Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hrp pili protein hrpa | SCC1_RS12195 | Not Available | Negative | 2700557 - 2700763 | 6841.06 |
| eal domain-containing protein | SCC1_RS12200 | Not Available | Positive | 2701109 - 2702689 | 59152.6 |
| sigma 54-interacting transcriptional regulator | SCC1_RS12205 | Not Available | Negative | 2702751 - 2703806 | 39212.5 |
| response regulator transcription factor | SCC1_RS12210 | Not Available | Negative | 2704174 - 2704815 | 23399.8 |
| pas domain s-box protein | SCC1_RS12215 | Not Available | Negative | 2704852 - 2706321 | 55865.1 |
| rna polymerase sigma factor | SCC1_RS12220 | Not Available | Negative | 2706563 - 2707108 | 20923.2 |
| type iii secretion system gatekeeper subunit sctw | SCC1_RS12225 | Not Available | Positive | 2707437 - 2708645 | 44309.7 |
| type iii secretion system export apparatus subunit sctv | SCC1_RS12230 | Not Available | Positive | 2708642 - 2710744 | 77578.7 |
| fha domain-containing protein | SCC1_RS12235 | Not Available | Positive | 2710753 - 2711688 | 34083.6 |
| type iii secretion system atpase sctn | SCC1_RS12240 | Not Available | Positive | 2711688 - 2713055 | 49204.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

