Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system chaperone | SCC1_RS12095 | Not Available | Negative | 2678852 - 2679274 | 15516.0 |
| avre-family type 3 secretion system effector | SCC1_RS12100 | Not Available | Negative | 2679310 - 2684193 | 173181.0 |
| pectate lyase | SCC1_RS12105 | Not Available | Positive | 2684374 - 2685846 | 47499.4 |
| dna-binding protein | SCC1_RS12110 | Not Available | Positive | 2685848 - 2686171 | 12175.3 |
| type vi secretion system paar protein | SCC1_RS12115 | Not Available | Negative | 2686272 - 2686538 | 8442.91 |
| duf2931 family protein | SCC1_RS12120 | Not Available | Negative | 2686588 - 2687268 | 25313.2 |
| duf2931 family protein | SCC1_RS12125 | Not Available | Negative | 2687434 - 2688123 | 25865.0 |
| t6ss phospholipase effector tle1-like catalytic domain-containing protein | SCC1_RS12130 | Not Available | Negative | 2688141 - 2690135 | 73226.5 |
| duf4123 domain-containing protein | SCC1_RS12135 | Not Available | Negative | 2690135 - 2690932 | 29697.6 |
| type vi secretion system tip protein vgrg | SCC1_RS12140 | Not Available | Negative | 2690929 - 2692956 | 74051.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

