Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | SCC1_RS11995 | Not Available | Negative | 2644023 - 2645030 | 37461.5 |
| hypothetical protein | SCC1_RS22665 | Not Available | Positive | 2645176 - 2645352 | 6657.46 |
| type iii effector hrpk domain-containing protein | SCC1_RS12000 | Not Available | Negative | 2645377 - 2647140 | 61989.0 |
| oligogalacturonate-specific porin kdgm family protein | SCC1_RS12005 | Not Available | Positive | 2647911 - 2648729 | 31295.1 |
| oligogalacturonate-specific porin kdgm family protein | SCC1_RS12010 | Not Available | Positive | 2648861 - 2649613 | 28371.7 |
| pectate lyase | SCC1_RS12015 | Not Available | Positive | 2649731 - 2651437 | 63467.1 |
| abc transporter substrate-binding protein | SCC1_RS12020 | Not Available | Negative | 2651640 - 2652761 | 42199.2 |
| hypothetical protein | SCC1_RS12025 | Not Available | Negative | 2653209 - 2653574 | 13672.2 |
| hypothetical protein | SCC1_RS12030 | Not Available | Negative | 2653626 - 2654177 | 21204.7 |
| duf2247 family protein | SCC1_RS12035 | Not Available | Negative | 2654304 - 2654825 | 19599.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

