Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 230933 - 233842 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 233968 - 234083 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 234136 - 234212 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 234267 - 234342 | Not Available |
| galactofuranose abc transporter, galactofuranose-binding protein ytfq | SCC1_RS01020 | Not Available | Positive | 234784 - 235740 | 34133.1 |
| galactofuranose abc transporter, atp-binding protein ytfr | SCC1_RS01025 | Not Available | Positive | 235932 - 237452 | 55438.4 |
| galactofuranose abc transporter, atp-binding protein ytft | SCC1_RS01030 | Not Available | Positive | 237439 - 238449 | 34978.6 |
| galactofuranose abc transporter, permease protein yjff | SCC1_RS01035 | Not Available | Positive | 238449 - 239411 | 34295.2 |
| hth-type transcriptional regulator hdfr | SCC1_RS01040 | Not Available | Negative | 239433 - 240260 | 31443.9 |
| duf413 domain-containing protein | SCC1_RS01045 | Not Available | Positive | 240381 - 240719 | 13236.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

