Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine exporter lyso family protein | SCC1_RS09695 | Not Available | Negative | 2134570 - 2135469 | 32507.2 |
| atp-dependent endonuclease | SCC1_RS09700 | Not Available | Positive | 2135781 - 2137445 | 63498.6 |
| cold shock-like protein cspd | SCC1_RS09705 | Not Available | Negative | 2137562 - 2137783 | 7928.43 |
| atp-dependent clp protease adapter clps | SCC1_RS09715 | Not Available | Positive | 2138205 - 2138525 | 12194.5 |
| atp-dependent clp protease atp-binding subunit clpa | SCC1_RS09720 | Not Available | Positive | 2138555 - 2140828 | 84110.7 |
| carboxymuconolactone decarboxylase family protein | SCC1_RS09725 | Not Available | Positive | 2141064 - 2141543 | 18095.7 |
| plp-dependent aminotransferase family protein | SCC1_RS09730 | Not Available | Negative | 2141544 - 2142989 | 52821.6 |
| translation initiation factor if-1 | SCC1_RS09735 | Not Available | Negative | 2143124 - 2143342 | 8236.07 |
| leucyl/phenylalanyl-trna--protein transferase | SCC1_RS09740 | Not Available | Negative | 2143456 - 2144160 | 26447.4 |
| heme abc transporter atp-binding protein/permease cydc | SCC1_RS09745 | Not Available | Negative | 2144194 - 2145933 | 63670.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

