Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein ybib | SCC1_RS09150 | Not Available | Positive | 2017487 - 2018455 | 35071.4 |
| m3 family metallopeptidase | SCC1_RS09155 | Not Available | Positive | 2018541 - 2020409 | 70760.8 |
| glutamine abc transporter atp-binding protein glnq | SCC1_RS09160 | Not Available | Negative | 2020646 - 2021368 | 26535.2 |
| glutamine abc transporter permease glnp | SCC1_RS09165 | Not Available | Negative | 2021365 - 2022024 | 24085.5 |
| glutamine abc transporter substrate-binding protein glnh | SCC1_RS09170 | Not Available | Negative | 2022051 - 2022797 | 27257.8 |
| dna starvation/stationary phase protection protein dps | SCC1_RS09175 | Not Available | Negative | 2023189 - 2023692 | 18409.0 |
| shikimate kinase | SCC1_RS09180 | Not Available | Positive | 2024055 - 2024606 | 22063.3 |
| threonine/homoserine exporter rhta | SCC1_RS09185 | Not Available | Negative | 2024594 - 2025481 | 31151.4 |
| outer membrane protein ompx | SCC1_RS09190 | Not Available | Positive | 2025858 - 2026373 | 18164.0 |
| mfs transporter | SCC1_RS09195 | Not Available | Positive | 2026660 - 2027829 | 41304.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

