Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-acp o-methyltransferase bioc | SCC1_RS08770 | Not Available | Positive | 1943346 - 1944107 | 28043.4 |
| dethiobiotin synthase | SCC1_RS08775 | Not Available | Positive | 1944100 - 1944780 | 24668.5 |
| hcp family type vi secretion system effector | SCC1_RS08780 | Not Available | Positive | 1945054 - 1945533 | 17747.1 |
| hypothetical protein | SCC1_RS08785 | Not Available | Positive | 1945615 - 1946307 | 26113.1 |
| hypothetical protein | SCC1_RS08790 | Not Available | Positive | 1946308 - 1946751 | 16606.8 |
| hypothetical protein | SCC1_RS08795 | Not Available | Positive | 1946791 - 1947219 | 16189.4 |
| excinuclease abc subunit uvrb | SCC1_RS08800 | Not Available | Positive | 1947985 - 1949997 | 75759.0 |
| glyoxalase | SCC1_RS08805 | Not Available | Positive | 1950026 - 1950457 | 15807.8 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | SCC1_RS08810 | Not Available | Negative | 1950433 - 1951365 | 33464.6 |
| gtp 3',8-cyclase moaa | SCC1_RS08815 | Not Available | Positive | 1951788 - 1952777 | 37103.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

