Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug effflux mfs transporter | SCC1_RS08360 | Not Available | Negative | 1860914 - 1862113 | 43056.1 |
| mfs transporter | SCC1_RS08365 | Not Available | Negative | 1862282 - 1863517 | 42316.2 |
| helix-turn-helix domain-containing protein | SCC1_RS08370 | Not Available | Positive | 1863584 - 1864039 | 17139.9 |
| glycoside hydrolase family 1 protein | SCC1_RS08375 | Not Available | Positive | 1864252 - 1865688 | 54001.8 |
| cold-shock protein | SCC1_RS08380 | Not Available | Positive | 1865849 - 1866331 | 17814.6 |
| duf2058 domain-containing protein | SCC1_RS08385 | Not Available | Positive | 1866511 - 1867050 | 20304.4 |
| diguanylate cyclase dgcj | SCC1_RS08390 | Not Available | Negative | 1867191 - 1868900 | 64696.6 |
| ymja family protein | SCC1_RS08395 | Not Available | Positive | 1868936 - 1869181 | 9480.79 |
| methionine synthase | SCC1_RS08400 | Not Available | Negative | 1869405 - 1870436 | 38621.4 |
| duf1852 domain-containing protein | SCC1_RS08405 | Not Available | Negative | 1870467 - 1871444 | 37407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

