Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytidine(34)-2'-o)-methyltransferase | SCC1_RS00640 | Not Available | Positive | 149923 - 150387 | 17277.5 |
| duf3142 domain-containing protein | SCC1_RS00645 | Not Available | Negative | 150398 - 151198 | 30289.9 |
| hypothetical protein | SCC1_RS00650 | Not Available | Negative | 151168 - 153342 | 80417.4 |
| envelope stress sensor histidine kinase cpxa | SCC1_RS00655 | Not Available | Negative | 153536 - 154906 | 51809.4 |
| envelope stress response regulator transcription factor cpxr | SCC1_RS00660 | Not Available | Negative | 154903 - 155601 | 26375.0 |
| cell-envelope stress modulator cpxp | SCC1_RS00665 | Not Available | Positive | 155755 - 156279 | 19627.6 |
| type ii toxin-antitoxin system hica family toxin | SCC1_RS00670 | Not Available | Positive | 156510 - 156785 | 10007.2 |
| type ii toxin-antitoxin system hicb family antitoxin | SCC1_RS00675 | Not Available | Positive | 156782 - 157144 | 13496.0 |
| duf4132 domain-containing protein | SCC1_RS00680 | Not Available | Positive | 157405 - 161148 | 143319.0 |
| atp-binding protein | SCC1_RS00685 | Not Available | Positive | 161218 - 162327 | 40683.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

