Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 1469185 - 1469261 | Not Available |
| duf3772 domain-containing protein | SCC1_RS06630 | Not Available | Positive | 1469660 - 1472113 | 88207.8 |
| d-amino-acid transaminase | SCC1_RS06635 | Not Available | Negative | 1472194 - 1473054 | 31944.1 |
| n-acetyl-d-glu racemase dgca | SCC1_RS06640 | Not Available | Negative | 1473097 - 1474077 | 35637.7 |
| alanine transaminase | SCC1_RS06645 | Not Available | Positive | 1474462 - 1475703 | 45887.3 |
| type ii secretion system pilot lipoprotein gsps | SCC1_RS06650 | Not Available | Positive | 1475811 - 1476224 | 14554.3 |
| type ii secretion system assembly factor gspb | SCC1_RS06655 | Not Available | Negative | 1476221 - 1476790 | 20439.8 |
| polysaccharide lyase family 1 protein | SCC1_RS06660 | Not Available | Positive | 1477318 - 1478886 | 56927.1 |
| glycosyl hydrolase family 28 protein | SCC1_RS06665 | Not Available | Positive | 1479013 - 1480992 | 71792.0 |
| type ii secretion system protein gspc | SCC1_RS06670 | Not Available | Positive | 1481043 - 1481906 | 31038.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

