Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | SCC1_RS06070 | Not Available | Positive | 1350339 - 1351460 | 40791.2 |
| histidine--trna ligase | SCC1_RS06075 | Not Available | Positive | 1351598 - 1352872 | 47333.6 |
| yfgm family protein | SCC1_RS06080 | Not Available | Positive | 1352886 - 1353506 | 22422.3 |
| outer membrane protein assembly factor bamb | SCC1_RS06085 | Not Available | Positive | 1353517 - 1354698 | 42601.3 |
| ribosome biogenesis gtpase der | SCC1_RS06090 | Not Available | Positive | 1354842 - 1356329 | 55134.2 |
| aec family transporter | SCC1_RS06095 | Not Available | Positive | 1356403 - 1357362 | 34119.7 |
| cupin domain-containing protein | SCC1_RS06100 | Not Available | Positive | 1357577 - 1358020 | 16592.7 |
| zinc ribbon domain-containing protein | SCC1_RS06105 | Not Available | Positive | 1358023 - 1358247 | 8286.89 |
| protealysin inhibitor emfourin | SCC1_RS06110 | Not Available | Negative | 1358256 - 1358615 | 13420.9 |
| m4 family metallopeptidase | SCC1_RS06115 | Not Available | Negative | 1358612 - 1359655 | 38830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

