Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 1260910 - 1260985 | Not Available |
| uracil-dna glycosylase | SCC1_RS05710 | Not Available | Negative | 1261146 - 1261832 | 25483.3 |
| autonomous glycyl radical cofactor grca | SCC1_RS05715 | Not Available | Positive | 1262209 - 1262592 | 14345.0 |
| atp-dependent rna helicase srmb | SCC1_RS05720 | Not Available | Negative | 1262655 - 1263980 | 49913.1 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase trmn | SCC1_RS05725 | Not Available | Positive | 1264115 - 1264861 | 27717.0 |
| l-aspartate oxidase | SCC1_RS05730 | Not Available | Negative | 1264931 - 1266532 | 59708.1 |
| rna polymerase sigma factor rpoe | SCC1_RS05735 | Not Available | Positive | 1266894 - 1267469 | 21752.9 |
| anti-sigma-e factor rsea | SCC1_RS05740 | Not Available | Positive | 1267529 - 1268176 | 23572.9 |
| sigma-e factor regulatory protein rseb | SCC1_RS05745 | Not Available | Positive | 1268176 - 1269138 | 35731.7 |
| soxr-reducing system protein rsec | SCC1_RS05750 | Not Available | Positive | 1269135 - 1269587 | 15929.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

