Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamd | SCC1_RS05340 | Not Available | Negative | 1189989 - 1190723 | 27384.5 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | SCC1_RS05350 | Not Available | Positive | 1190858 - 1191835 | 36771.3 |
| purine nucleoside phosphorylase yfih | SCC1_RS05355 | Not Available | Positive | 1191879 - 1192604 | 25922.0 |
| atp-dependent chaperone clpb | SCC1_RS05360 | Not Available | Positive | 1192738 - 1195314 | 95585.9 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 1195802 - 1197343 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1197484 - 1197559 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 1197792 - 1200701 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1200827 - 1200942 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1200995 - 1201071 | Not Available |
| endonuclease/exonuclease/phosphatase family protein | SCC1_RS05395 | Not Available | Positive | 1201298 - 1202086 | 29586.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

