Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hcp family type vi secretion system effector | SCC1_RS05080 | Not Available | Positive | 1138437 - 1138955 | 19079.6 |
| type vi secretion system tip protein vgrg | SCC1_RS05085 | Not Available | Positive | 1139176 - 1141212 | 75068.1 |
| paar domain-containing protein | SCC1_RS05090 | Not Available | Positive | 1141222 - 1142592 | 46165.1 |
| ankyrin repeat domain-containing protein | SCC1_RS05095 | Not Available | Positive | 1142673 - 1143371 | 25442.2 |
| duf4123 domain-containing protein | SCC1_RS05100 | Not Available | Positive | 1143530 - 1144486 | 37149.1 |
| duf4123 domain-containing protein | SCC1_RS05105 | Not Available | Positive | 1144483 - 1145400 | 34559.5 |
| rhs repeat-associated core domain-containing protein | SCC1_RS05110 | Not Available | Positive | 1145421 - 1150538 | 190379.0 |
| hypothetical protein | SCC1_RS05115 | Not Available | Positive | 1150547 - 1150918 | 14227.7 |
| syme family type i addiction module toxin | SCC1_RS05120 | Not Available | Negative | 1150978 - 1151322 | 12414.7 |
| syme family type i addiction module toxin | SCC1_RS05125 | Not Available | Negative | 1151319 - 1151648 | 12109.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

