Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lipoprotein tssj | SCC1_RS05030 | Not Available | Positive | 1122626 - 1123147 | 19354.0 |
| type vi secretion system baseplate subunit tssk | SCC1_RS05035 | Not Available | Positive | 1123150 - 1124487 | 49408.0 |
| type ivb secretion system protein icmh/dotu | SCC1_RS05040 | Not Available | Positive | 1124503 - 1125279 | 29975.1 |
| type vi secretion system atpase tssh | SCC1_RS05045 | Not Available | Positive | 1125293 - 1127890 | 95507.3 |
| sigma-54 interaction domain-containing protein | SCC1_RS05050 | Not Available | Positive | 1127893 - 1129431 | 57892.8 |
| type vi secretion system-associated protein vasi | SCC1_RS05055 | Not Available | Positive | 1129431 - 1129991 | 20095.8 |
| type vi secretion system protein tssa | SCC1_RS05060 | Not Available | Positive | 1130003 - 1131424 | 52331.4 |
| type vi secretion system membrane subunit tssm | SCC1_RS05065 | Not Available | Positive | 1131449 - 1134946 | 132655.0 |
| vasl domain-containing protein | SCC1_RS05070 | Not Available | Positive | 1134995 - 1136428 | 54892.9 |
| tetratricopeptide repeat protein | SCC1_RS05075 | Not Available | Positive | 1136457 - 1137812 | 50028.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

