Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium versatile |
| Strain | strain SCC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1195122 bp
Thymine Count
1198132 bp
Guanine Count
1294470 bp
Cytosine Count
1283286 bp
Genome Length
4974798 bp
Protein-coding Genes
4300 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | SCC1_RS04980 | Not Available | Positive | 1110868 - 1112118 | 45908.6 |
| pts sugar transporter subunit iib | SCC1_RS04985 | Not Available | Positive | 1112446 - 1112760 | 11451.1 |
| lysr family transcriptional regulator | SCC1_RS04990 | Not Available | Negative | 1112992 - 1113897 | 33447.9 |
| alpha/beta hydrolase | SCC1_RS04995 | Not Available | Positive | 1114257 - 1115285 | 37832.2 |
| type vi secretion system contractile sheath small subunit | SCC1_RS05000 | Not Available | Positive | 1116221 - 1116724 | 18534.2 |
| type vi secretion system contractile sheath large subunit | SCC1_RS05005 | Not Available | Positive | 1116757 - 1118235 | 55274.9 |
| type vi secretion system baseplate subunit tsse | SCC1_RS05010 | Not Available | Positive | 1118241 - 1118672 | 16345.3 |
| type vi secretion system baseplate subunit tssf | SCC1_RS05015 | Not Available | Positive | 1118675 - 1120441 | 67098.1 |
| type vi secretion system baseplate subunit tssg | SCC1_RS05020 | Not Available | Positive | 1120405 - 1121403 | 37574.8 |
| type vi secretion system-associated fha domain protein tagh | SCC1_RS05025 | Not Available | Positive | 1121406 - 1122626 | 44944.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

