Francisella tularensis subsp. novicida strain TCH2015

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Francisellaceae

Genus

Francisella

Description

Francisella tularensis subsp. novicida strain TCH2015 is a Gram-negative, rod-shaped bacterium that exhibits a free-living biotic relationship. This strain is characterized by its mesophilic nature, thriving in moderate temperature conditions. It is an aerobic organism, requiring oxygen for survival, and is non-motile, lacking the ability to move independently despite the presence of flagella. This bacterium is notable for its unique habitat, being found in aquatic environments, which may influence its ecological interactions and adaptations. The organism possesses a single genomic replicon and features a double membrane structure, characteristic of its classification within the Francisella genus. The specific accession number for Francisella tularensis subsp. novicida strain TCH2015 is NZ_CP021490.1, which provides a reference for further genomic studies and analyses. Understanding the ecological role of this strain within aquatic systems can provide insights into the dynamics of microbial communities and the potential impact of environmental factors on its distribution and survival. The ability of F. tularensis subsp. novicida to thrive in such environments highlights its adaptability and potential interactions within aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyFrancisellaceae
GenusFrancisella
SpeciesFrancisella tularensis
Strainsubsp. novicida strain TCH2015

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Francisella tularensis subsp. novicida strain TCH2015
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Francisella tularensis subsp. novicida strain TCH2015 chromosome,

Gene Summary

Adenine Count

674555 bp

Thymine Count

678409 bp

Guanine Count

326478 bp

Cytosine Count

320645 bp

Genome Length

2000087 bp

Protein-coding Genes

1878 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system tube protein iglcB4919_RS03485Not AvailablePositive726792 - 72742122134.7
type vi secretion system baseplate subunit tsskB4919_RS03490Not AvailablePositive727442 - 72863846433.9
type vi secretion system protein pdpeB4919_RS03495Not AvailableNegative728645 - 72921121651.8
type vi secretion system effector pdpcB4919_RS03500Not AvailableNegative729229 - 733206155573.0
type vi secretion system baseplate protein igljB4919_RS03505Not AvailableNegative733246 - 73401930232.3
type vi secretion system protein igli family proteinB4919_RS03510Not AvailableNegative733985 - 73513644588.8
dotu family type iv/vi secretion system proteinB4919_RS03515Not AvailableNegative735158 - 73578124590.6
type vi secretion system baseplate subunit tssf/iglhB4919_RS03520Not AvailableNegative735794 - 73722455335.9
type vi secretion system paar-like protein iglgB4919_RS03525Not AvailableNegative737237 - 73775818398.2
type vi secretion system putative effector iglfB4919_RS03530Not AvailableNegative737759 - 73948967897.4

Displaying genes 691 – 700 of 1930 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.