Ralstonia solanacearum strain SEPPX05

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Ralstonia

Description

Ralstonia solanacearum strain SEPPX05 is a Gram-negative bacterium known for its mobility and pathogenicity, particularly affecting a range of plant hosts. This strain exhibits a dual-replicon system, consisting of two replicons that contribute to its genetic diversity and adaptability. The primary ecological niche for R. solanacearum strain SEPPX05 includes freshwater environments, soil, and water, indicating a broad habitat range that supports its survival and dissemination. This bacterium is a significant plant pathogen, responsible for causing several diseases, including bacterial wilt, Moko disease of banana, and brown rot in potato and tomato. It notably affects various members of the plant family Solanaceae, such as Solanum tuberosum (potato), Solanum lycopersicum (tomato), and Nicotiana tabacum (tobacco), as well as other species like Arachis hypogaea (peanut) and Zingiber officinale (ginger). The health effects of R. solanacearum strain SEPPX05 manifest primarily through symptoms like wilting and decay, impacting agricultural productivity and crop health. Given its ability to thrive in multiple environments and its wide host range, this strain poses a significant risk to agricultural systems, particularly in regions where susceptible crops are grown. Understanding the ecological and biological interactions of R. solanacearum can inform management strategies to mitigate its impact on food security and crop health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusRalstonia
SpeciesRalstonia solanacearum
Strainstrain SEPPX05

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; soil; water
Biotic relationshipNot Available
Host(s)Viridiplantae, Solanum tuberosum, Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete

Gene Summary

Adenine Count

339165 bp

Thymine Count

343464 bp

Guanine Count

698445 bp

Cytosine Count

685011 bp

Genome Length

2066085 bp

Protein-coding Genes

1669 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding domain-containing proteinRSSE_RS22940Not AvailableNegative949030 - 94980027435.8
duf692 domain-containing proteinRSSE_RS22945Not AvailableNegative949787 - 95066531226.3
duf2282 domain-containing proteinRSSE_RS22950Not AvailableNegative950687 - 9509568932.79
h-ns family nucleoid-associated regulatory proteinRSSE_RS22955Not AvailableNegative951505 - 9517569144.72
putative zinc-binding metallopeptidaseRSSE_RS22960Not AvailableNegative952102 - 95316940378.9
type iii effector proteinRSSE_RS22965Not AvailableNegative953650 - 957576139169.0
metal-dependent hydrolaseRSSE_RS22970Not AvailableNegative958035 - 95878727001.4
fatty acid desaturase family proteinRSSE_RS22975Not AvailableNegative958777 - 95970333940.3
hypothetical proteinRSSE_RS22980Not AvailableNegative959700 - 96043127222.0
methyl-accepting chemotaxis proteinRSSE_RS22990Not AvailablePositive960899 - 96247355476.9

Displaying genes 811 – 820 of 5511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial wiltCausesPMC10792059
Bacterial wiltCausesPMC12630949
Bacterial wiltCausesPMC6638647
Moko disease of bananaCausesPMC6638647
Brown rot of potatoCausesPMC6638647
Bacterial wiltCausesPMC6703095
Bacterial wiltCausesPMC7344456
WiltingCausesPMC7344456
Bacterial wiltCausesPMC9698820
Brown rotCausesPMC9190974

Displaying health effects 1 – 10 of 13 in total