Ralstonia solanacearum strain SEPPX05

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Ralstonia

Description

Ralstonia solanacearum strain SEPPX05 is a Gram-negative bacterium known for its mobility and pathogenicity, particularly affecting a range of plant hosts. This strain exhibits a dual-replicon system, consisting of two replicons that contribute to its genetic diversity and adaptability. The primary ecological niche for R. solanacearum strain SEPPX05 includes freshwater environments, soil, and water, indicating a broad habitat range that supports its survival and dissemination. This bacterium is a significant plant pathogen, responsible for causing several diseases, including bacterial wilt, Moko disease of banana, and brown rot in potato and tomato. It notably affects various members of the plant family Solanaceae, such as Solanum tuberosum (potato), Solanum lycopersicum (tomato), and Nicotiana tabacum (tobacco), as well as other species like Arachis hypogaea (peanut) and Zingiber officinale (ginger). The health effects of R. solanacearum strain SEPPX05 manifest primarily through symptoms like wilting and decay, impacting agricultural productivity and crop health. Given its ability to thrive in multiple environments and its wide host range, this strain poses a significant risk to agricultural systems, particularly in regions where susceptible crops are grown. Understanding the ecological and biological interactions of R. solanacearum can inform management strategies to mitigate its impact on food security and crop health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusRalstonia
SpeciesRalstonia solanacearum
Strainstrain SEPPX05

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water; soil; water
Biotic relationshipNot Available
Host(s)Viridiplantae, Solanum tuberosum, Solanum lycopersicum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete

Gene Summary

Adenine Count

339165 bp

Thymine Count

343464 bp

Guanine Count

698445 bp

Cytosine Count

685011 bp

Genome Length

2066085 bp

Protein-coding Genes

1669 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is21 family transposaseRSSE_RS20850Not AvailableNegative462963 - 46397937600.7
is6 family transposaseRSSE_RS20855Not AvailableNegative464103 - 46483728353.3
yopt-type cysteine protease domain-containing proteinRSSE_RS20860Not AvailablePositive464903 - 46527113235.6
ulp1 family isopeptidaseRSSE_RS20865Not AvailablePositive466160 - 46856588212.7
cyclopropane-fatty-acyl-phospholipid synthaseRSSE_RS28530Not AvailablePositive468550 - 4687116023.05
cyclopropane-fatty-acyl-phospholipid synthaseRSSE_RS20875Not AvailablePositive468787 - 46906610710.7
is66-like element accessory protein tnpaRSSE_RS20880Not AvailablePositive469147 - 46952413952.8
is66 family insertion sequence element accessory protein tnpbRSSE_RS20885Not AvailablePositive469566 - 46985610716.1
cyclopropane-fatty-acyl-phospholipid synthaseRSSE_RS20890Not AvailablePositive469919 - 47090836509.7
cyclopropane-fatty-acyl-phospholipid synthaseRSSE_RS20895Not AvailablePositive471089 - 47141812270.0

Displaying genes 431 – 440 of 5511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial wiltCausesPMC10792059
Bacterial wiltCausesPMC12630949
Bacterial wiltCausesPMC6638647
Moko disease of bananaCausesPMC6638647
Brown rot of potatoCausesPMC6638647
Bacterial wiltCausesPMC6703095
Bacterial wiltCausesPMC7344456
WiltingCausesPMC7344456
Bacterial wiltCausesPMC9698820
Brown rotCausesPMC9190974

Displaying health effects 1 – 10 of 13 in total