Escherichia coli strain 95NR1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain 95NR1 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism. It can be found in pairs or singles and possesses flagella, granting it mobility. This strain thrives at an optimal temperature of 37°C and falls within the mesophilic temperature range. Notably, it contains three replicons and is characterized by a double membrane structure. The ecological niche of E. coli strain 95NR1 is primarily host-associated, indicating its reliance on various hosts for survival and propagation. It has been identified in a diverse range of hosts, including Homo sapiens, Gallus gallus, and numerous other animals, plants, and invertebrates. This extensive list of hosts underscores its adaptability and ecological versatility. In terms of health implications, E. coli strain 95NR1 is associated with a multitude of pathogenic effects in humans, such as urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and foodborne illnesses. It has also been linked to more severe conditions like hemolytic uremic syndrome (HUS), septicemia, and various inflammatory diseases. The strain's ability to inhabit multiple hosts and its pathogenic potential highlight its role in both environmental and clinical settings. This adaptability may facilitate the transmission of antibiotic resistance and other virulence factors among different species, posing a significant challenge for public health and necessitating ongoing monitoring and research into its ecological impact and pathogenic mechanisms.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain 95NR1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain 95NR1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain 95NR1 plasmid p95NR1A, complete sequence.

Gene Summary

Adenine Count

22646 bp

Thymine Count

22762 bp

Guanine Count

20666 bp

Cytosine Count

20843 bp

Genome Length

86917 bp

Protein-coding Genes

5 genes

Non-Coding Genes

100 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer entry exclusion protein trasEC95NR1_RS29975Not AvailableNegative14098 - 1460719435.7
conjugal transfer mating-pair stabilization protein tragEC95NR1_RS29980Not AvailableNegative14604 - 17429102736.0
is3 family transposaseEC95NR1_RS29985Not AvailableNegative17426 - 1802522400.8
is3 family transposaseEC95NR1_RS29990Not AvailableNegative18021 - 181765798.15
conjugal transfer pilus-stabilizing protein trapEC95NR1_RS29995Not AvailableNegative18115 - 1870522048.7
f-type conjugal transfer pilus assembly protein trabEC95NR1_RS30000Not AvailableNegative18695 - 2012250445.7
type-f conjugative transfer system secretin trakEC95NR1_RS30005Not AvailableNegative20122 - 2085025628.6
type iv conjugative transfer system protein traeEC95NR1_RS30010Not AvailableNegative20837 - 2140321157.5
type iv conjugative transfer system protein tralEC95NR1_RS30015Not AvailableNegative21425 - 2173611881.6
type iv conjugative transfer system pilin traaEC95NR1_RS30020Not AvailableNegative21751 - 2211012666.2

Displaying genes 5731 – 5740 of 5812 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total