Candidatus Nitrosomarinus catalina strain SPOT01

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Nitrososphaeria

Order

Nitrosopumilales

Family

Nitrosopumilaceae

Genus

Candidatus Nitrosomarinus

Description

Candidatus Nitrosomarinus catalina strain SPOT01 is characterized by having a single replicon, indicating a streamlined genomic structure that may aid in its adaptability and efficiency in its ecological niche. The strain is cataloged under the accession number NZ_CP021324.1, which provides a reference for its genomic sequence and related studies. As a member of the Nitrosomonadaceae family, Candidatus Nitrosomarinus catalina strain SPOT01 is involved in the process of ammonia oxidation, a critical step in the nitrogen cycle. This process contributes to the conversion of ammonia to nitrite, which is fundamental for nutrient cycling within marine ecosystems. The presence of this strain in marine environments highlights its potential role in regulating nitrogen levels, which can influence primary productivity and overall ecosystem health. Understanding the characteristics and functional roles of Candidatus Nitrosomarinus catalina strain SPOT01 can provide insights into microbial contributions to biogeochemical cycles in oceanic systems. The single replicon structure suggests an evolutionary adaptation that may enhance its survival and efficiency in specific ecological niches, emphasizing its importance in marine nitrogen cycling processes.

Taxonomy

KingdomThermoproteati
PhylumNitrososphaerota
ClassNitrososphaeria
OrderNitrosopumilales
FamilyNitrosopumilaceae
GenusCandidatus Nitrosomarinus
SpeciesCandidatus Nitrosomarinus catalinensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosomarinus catalina strain SPOT01 chromosome,

Gene Summary

Adenine Count

464438 bp

Thymine Count

468067 bp

Guanine Count

211779 bp

Cytosine Count

215792 bp

Genome Length

1360076 bp

Protein-coding Genes

1670 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exosome complex protein rrp42NMSP_RS06180Not AvailableNegative1019369 - 102018729344.0
exosome complex exonuclease rrp41NMSP_RS06185Not AvailableNegative1020190 - 102092426676.4
exosome complex rna-binding protein rrp4NMSP_RS06190Not AvailableNegative1020924 - 102160424660.8
ribosome assembly factor sbdsNMSP_RS06195Not AvailableNegative1021604 - 102229025575.0
dna-directed rna polymerase subunit dNMSP_RS06200Not AvailablePositive1022376 - 102297521886.2
50s ribosomal protein l18eNMSP_RS06205Not AvailablePositive1023021 - 102336812299.0
50s ribosomal protein l13NMSP_RS06210Not AvailablePositive1023361 - 102387019265.5
30s ribosomal protein s9NMSP_RS06215Not AvailablePositive1023872 - 102431816625.2
nucleotidyltransferase family proteinNMSP_RS06220Not AvailablePositive1024322 - 102503827305.7
3-isopropylmalate dehydratase small subunitNMSP_RS06225Not AvailableNegative1025016 - 102560022072.0

Displaying genes 1291 – 1300 of 1714 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.