Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | CAY62_RS17125 | Not Available | Negative | 484663 - 485139 | 17570.0 |
| hypothetical protein | CAY62_RS17130 | Not Available | Positive | 485237 - 485755 | 20520.1 |
| hypothetical protein | CAY62_RS17135 | Not Available | Negative | 485879 - 486154 | 10034.5 |
| mfs transporter | CAY62_RS17140 | Not Available | Negative | 486302 - 487444 | 41300.9 |
| arac family transcriptional regulator | CAY62_RS17145 | Not Available | Positive | 487553 - 488320 | 29222.2 |
| duf2799 domain-containing protein | CAY62_RS17150 | Not Available | Negative | 488354 - 488905 | 21396.6 |
| hypothetical protein | CAY62_RS21780 | Not Available | Negative | 489316 - 489486 | 6874.86 |
| hth-type transcriptional regulator hdfr | CAY62_RS17155 | Not Available | Negative | 489700 - 490569 | 32534.0 |
| duf413 domain-containing protein | CAY62_RS17160 | Not Available | Positive | 490761 - 491111 | 13277.2 |
| glutathione synthase | CAY62_RS17165 | Not Available | Positive | 491231 - 492259 | 38308.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


