Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase family protein | CAY62_RS16585 | Not Available | Positive | 367545 - 368288 | 28107.4 |
| cation:proton antiporter | CAY62_RS16590 | Not Available | Positive | 368612 - 369892 | 46512.3 |
| type ii toxin-antitoxin system rele/pare family toxin | CAY62_RS16595 | Not Available | Negative | 369988 - 370206 | 8432.45 |
| mlic family protein | CAY62_RS16600 | Not Available | Positive | 370382 - 370960 | 21374.5 |
| aromatic amino acid transaminase | CAY62_RS16605 | Not Available | Negative | 371075 - 372253 | 42794.5 |
| hypothetical protein | CAY62_RS16610 | Not Available | Positive | 372364 - 372543 | 6698.85 |
| nadph-dependent fmn reductase | CAY62_RS16615 | Not Available | Negative | 372622 - 373149 | 19171.6 |
| putative quinol monooxygenase | CAY62_RS16620 | Not Available | Positive | 373458 - 373748 | 10787.8 |
| n-acetylmuramic acid 6-phosphate etherase | CAY62_RS16625 | Not Available | Negative | 373850 - 374746 | 31262.8 |
| lytic transglycosylase f | CAY62_RS16630 | Not Available | Positive | 374968 - 376419 | 55755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


