Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2861 family protein | CAY62_RS16245 | Not Available | Negative | 299959 - 300825 | 32862.2 |
| response regulator transcription factor | CAY62_RS16250 | Not Available | Negative | 300830 - 301489 | 24693.7 |
| sensor histidine kinase vxra | CAY62_RS16255 | Not Available | Negative | 301464 - 302906 | 55128.7 |
| re/si-specific nad(p)(+) transhydrogenase subunit beta | CAY62_RS16260 | Not Available | Negative | 303097 - 304473 | 48541.8 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | CAY62_RS16265 | Not Available | Negative | 304484 - 306040 | 54925.4 |
| hlyu family transcriptional regulator | CAY62_RS16270 | Not Available | Negative | 306585 - 306866 | 10570.7 |
| hypothetical protein | CAY62_RS16275 | Not Available | Negative | 307086 - 307301 | 7551.0 |
| hypothetical protein | CAY62_RS16280 | Not Available | Negative | 307676 - 307867 | 7252.8 |
| recq family atp-dependent dna helicase | CAY62_RS16285 | Not Available | Positive | 308481 - 308615 | 5002.0 |
| bifunctional metallophosphatase/5'-nucleotidase | CAY62_RS16290 | Not Available | Negative | 308758 - 310518 | 64202.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


