Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l15 | CAY62_RS12870 | Not Available | Negative | 2743245 - 2743679 | 14881.2 |
| 50s ribosomal protein l30 | CAY62_RS12875 | Not Available | Negative | 2743685 - 2743864 | 6714.42 |
| 30s ribosomal protein s5 | CAY62_RS12880 | Not Available | Negative | 2743870 - 2744367 | 17430.2 |
| 50s ribosomal protein l18 | CAY62_RS12885 | Not Available | Negative | 2744380 - 2744733 | 12583.2 |
| 50s ribosomal protein l6 | CAY62_RS12890 | Not Available | Negative | 2744743 - 2745276 | 18921.1 |
| 30s ribosomal protein s8 | CAY62_RS12895 | Not Available | Negative | 2745289 - 2745681 | 14054.4 |
| 30s ribosomal protein s14 | CAY62_RS12900 | Not Available | Negative | 2745717 - 2746022 | 11525.1 |
| 50s ribosomal protein l5 | CAY62_RS12905 | Not Available | Negative | 2746038 - 2746577 | 20370.8 |
| 50s ribosomal protein l24 | CAY62_RS12910 | Not Available | Negative | 2746593 - 2746904 | 11032.6 |
| 50s ribosomal protein l14 | CAY62_RS12915 | Not Available | Negative | 2746917 - 2747288 | 13632.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


