Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein zape | CAY62_RS12420 | Not Available | Negative | 2647113 - 2648216 | 42838.6 |
| z-ring associated protein zapg | CAY62_RS12425 | Not Available | Positive | 2648372 - 2648833 | 17110.1 |
| do family serine endopeptidase | CAY62_RS12430 | Not Available | Positive | 2648947 - 2650314 | 48067.3 |
| outer membrane-stress sensor serine endopeptidase degs | CAY62_RS12435 | Not Available | Positive | 2650462 - 2651577 | 39692.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | CAY62_RS12440 | Not Available | Negative | 2651684 - 2652940 | 44160.6 |
| bola family iron metabolism protein ibag | CAY62_RS12445 | Not Available | Negative | 2652951 - 2653205 | 9341.4 |
| lipid asymmetry maintenance protein mlab | CAY62_RS12450 | Not Available | Negative | 2653225 - 2653536 | 11721.2 |
| phospholipid-binding protein mlac | CAY62_RS12455 | Not Available | Negative | 2653539 - 2654174 | 23978.2 |
| outer membrane lipid asymmetry maintenance protein mlad | CAY62_RS12460 | Not Available | Negative | 2654184 - 2654663 | 17098.7 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | CAY62_RS12465 | Not Available | Negative | 2654689 - 2655471 | 27929.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


