Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | CAY62_RS12270 | Not Available | Negative | 2614802 - 2617516 | 103233.0 |
| duf721 domain-containing protein | CAY62_RS12275 | Not Available | Positive | 2617987 - 2618457 | 17379.0 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | CAY62_RS12280 | Not Available | Negative | 2618563 - 2619480 | 33870.6 |
| cell division protein ftsz | CAY62_RS12285 | Not Available | Negative | 2619755 - 2620903 | 40027.1 |
| cell division protein ftsa | CAY62_RS12290 | Not Available | Negative | 2620939 - 2622198 | 45286.3 |
| cell division protein ftsq/divib | CAY62_RS12295 | Not Available | Negative | 2622198 - 2622989 | 30006.4 |
| udp-n-acetylmuramate--l-alanine ligase | CAY62_RS12300 | Not Available | Negative | 2623261 - 2624721 | 52767.3 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | CAY62_RS12305 | Not Available | Negative | 2624737 - 2625801 | 37832.0 |
| cell division protein ftsw | CAY62_RS12310 | Not Available | Negative | 2625788 - 2627092 | 47913.6 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | CAY62_RS12315 | Not Available | Negative | 2627086 - 2628429 | 47714.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


