Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf423 domain-containing protein | CAY62_RS11225 | Not Available | Negative | 2416000 - 2416404 | 14299.7 |
| alpha/beta family hydrolase | CAY62_RS11230 | Not Available | Negative | 2416409 - 2417107 | 25608.7 |
| transcriptional regulator gcva | CAY62_RS11235 | Not Available | Negative | 2417097 - 2418008 | 34204.0 |
| cysteine desulfurase csda | CAY62_RS11240 | Not Available | Positive | 2418380 - 2419600 | 44118.7 |
| cysteine desulfurase sulfur acceptor subunit csde | CAY62_RS11245 | Not Available | Positive | 2419618 - 2420043 | 15858.0 |
| hypothetical protein | CAY62_RS11250 | Not Available | Negative | 2420070 - 2420348 | 11043.0 |
| hypothetical protein | CAY62_RS11255 | Not Available | Negative | 2420492 - 2420887 | 14138.9 |
| hypothetical protein | CAY62_RS21590 | Not Available | Positive | 2421431 - 2421607 | 6522.49 |
| trna cyclic n6-threonylcarbamoyladenosine(37) synthase tcda | CAY62_RS11260 | Not Available | Negative | 2421696 - 2422499 | 29175.1 |
| murein transglycosylase a | CAY62_RS11265 | Not Available | Negative | 2422604 - 2423716 | 41314.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


