Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | CAY62_RS10755 | Not Available | Positive | 2319503 - 2319628 | 4480.48 |
| ai-2e family transporter | CAY62_RS10760 | Not Available | Negative | 2319757 - 2320836 | 39497.0 |
| sulfurtransferase tusa family protein | CAY62_RS10765 | Not Available | Negative | 2320839 - 2321063 | 8236.03 |
| tetratricopeptide repeat protein | CAY62_RS10770 | Not Available | Positive | 2321272 - 2322735 | 54731.9 |
| arsenate reductase (glutaredoxin) | CAY62_RS10775 | Not Available | Positive | 2322744 - 2323094 | 13064.8 |
| nad(p)h:quinone oxidoreductase | CAY62_RS10780 | Not Available | Positive | 2323095 - 2323670 | 20723.0 |
| duf2069 domain-containing protein | CAY62_RS10785 | Not Available | Positive | 2323711 - 2324079 | 14262.6 |
| duf2066 domain-containing protein | CAY62_RS10790 | Not Available | Negative | 2324202 - 2325326 | 41083.6 |
| uracil-xanthine permease family protein | CAY62_RS10795 | Not Available | Positive | 2325666 - 2326931 | 44002.6 |
| efflux rnd transporter permease subunit | CAY62_RS10800 | Not Available | Negative | 2327024 - 2330134 | 112359.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


