Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 2290207 - 2290281 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2290317 - 2290401 | Not Available |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | CAY62_RS10615 | Not Available | Negative | 2290721 - 2291881 | 43333.2 |
| monofunctional biosynthetic peptidoglycan transglycosylase | CAY62_RS10620 | Not Available | Positive | 2292022 - 2292714 | 26539.6 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | CAY62_RS10625 | Not Available | Positive | 2292879 - 2294303 | 53486.0 |
| phoh family protein | CAY62_RS10630 | Not Available | Positive | 2294426 - 2295544 | 41770.1 |
| rrna maturation rnase ybey | CAY62_RS10635 | Not Available | Positive | 2295544 - 2296008 | 17451.4 |
| cnnm family magnesium/cobalt transport protein corc | CAY62_RS10640 | Not Available | Positive | 2296086 - 2296958 | 33146.8 |
| apolipoprotein n-acyltransferase | CAY62_RS10645 | Not Available | Positive | 2296965 - 2298518 | 57878.1 |
| ysc84-related protein | CAY62_RS10650 | Not Available | Positive | 2298635 - 2299330 | 24419.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


