Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide export protein | CAY62_RS09940 | Not Available | Negative | 2182887 - 2184041 | 42087.3 |
| hypothetical protein | CAY62_RS09945 | Not Available | Positive | 2184610 - 2184837 | 6832.92 |
| yjbf family lipoprotein | CAY62_RS09950 | Not Available | Positive | 2184966 - 2185667 | 26064.6 |
| capsule biosynthesis gfcc family protein | CAY62_RS09955 | Not Available | Positive | 2185684 - 2186502 | 30807.6 |
| amino acid abc transporter atp-binding protein | CAY62_RS09960 | Not Available | Positive | 2186535 - 2187389 | 32000.2 |
| is5 family transposase | CAY62_RS09965 | Not Available | Negative | 2187395 - 2188191 | 30232.3 |
| amino acid abc transporter atp-binding protein | CAY62_RS09970 | Not Available | Positive | 2188318 - 2189577 | 47745.4 |
| ompa family protein | CAY62_RS09975 | Not Available | Positive | 2189948 - 2190913 | 34437.0 |
| hypothetical protein | CAY62_RS09980 | Not Available | Positive | 2191017 - 2191229 | 7781.83 |
| amino acid abc transporter atp-binding protein | CAY62_RS09985 | Not Available | Negative | 2191330 - 2191509 | 6914.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


