Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is256 family transposase | CAY62_RS09840 | Not Available | Positive | 2161072 - 2162280 | 46568.9 |
| utp--glucose-1-phosphate uridylyltransferase galu | CAY62_RS09845 | Not Available | Negative | 2162401 - 2163291 | 32381.4 |
| glycosyltransferase family 2 protein | CAY62_RS09850 | Not Available | Negative | 2163288 - 2164070 | 30183.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | CAY62_RS09855 | Not Available | Negative | 2164072 - 2164617 | 20588.3 |
| dtdp-4-dehydrorhamnose reductase | CAY62_RS09860 | Not Available | Negative | 2164635 - 2165525 | 32397.2 |
| glucose-1-phosphate thymidylyltransferase rfba | CAY62_RS09865 | Not Available | Negative | 2165538 - 2166410 | 32368.8 |
| dtdp-glucose 4,6-dehydratase | CAY62_RS09870 | Not Available | Negative | 2166490 - 2167551 | 40025.2 |
| abc transporter atp-binding protein | CAY62_RS09875 | Not Available | Negative | 2167593 - 2169377 | 66488.4 |
| polysaccharide pyruvyl transferase family protein | CAY62_RS09880 | Not Available | Negative | 2169385 - 2170440 | 40557.6 |
| hypothetical protein | CAY62_RS09885 | Not Available | Negative | 2170449 - 2171414 | 37133.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


