Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quorum-sensing sigma-54 dependent transcriptional regulator luxo | CAY62_RS09275 | Not Available | Negative | 2028364 - 2029803 | 52789.1 |
| excinuclease abc subunit uvrb | CAY62_RS09280 | Not Available | Negative | 2030151 - 2032178 | 76686.5 |
| hypothetical protein | CAY62_RS09285 | Not Available | Negative | 2032378 - 2032812 | 16084.0 |
| dipeptidase pepe | CAY62_RS09290 | Not Available | Negative | 2033557 - 2034294 | 27013.4 |
| electron transport complex subunit rsxa | CAY62_RS09295 | Not Available | Positive | 2034675 - 2035256 | 20862.6 |
| electron transport complex subunit rsxb | CAY62_RS09300 | Not Available | Positive | 2035258 - 2035836 | 20288.6 |
| electron transport complex subunit rsxc | CAY62_RS09305 | Not Available | Positive | 2035839 - 2038157 | 83739.0 |
| electron transport complex subunit rsxd | CAY62_RS09310 | Not Available | Positive | 2038151 - 2039209 | 38085.5 |
| electron transport complex subunit rsxg | CAY62_RS09315 | Not Available | Positive | 2039218 - 2039850 | 22705.4 |
| electron transport complex subunit e | CAY62_RS09320 | Not Available | Positive | 2039853 - 2040539 | 24486.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


