Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS22195 | Not Available | Positive | 2022386 - 2022511 | 4636.69 |
| hypothetical protein | CAY62_RS09230 | Not Available | Negative | 2022594 - 2023130 | 21197.4 |
| molybdopterin synthase catalytic subunit moae | CAY62_RS09235 | Not Available | Negative | 2023491 - 2023940 | 16839.7 |
| molybdopterin synthase sulfur carrier subunit | CAY62_RS09240 | Not Available | Negative | 2023943 - 2024188 | 8831.61 |
| cyclic pyranopterin monophosphate synthase moac | CAY62_RS09245 | Not Available | Negative | 2024185 - 2024664 | 17172.9 |
| gtp 3',8-cyclase moaa | CAY62_RS09250 | Not Available | Negative | 2024738 - 2025724 | 37119.6 |
| hypothetical protein | CAY62_RS09255 | Not Available | Positive | 2026048 - 2026275 | 8318.92 |
| lon peptidase substrate-binding domain-containing protein | CAY62_RS09260 | Not Available | Positive | 2026396 - 2026971 | 22586.3 |
| uridine diphosphate-n-acetylglucosamine-binding protein yvck | CAY62_RS09265 | Not Available | Positive | 2027134 - 2028027 | 32252.8 |
| hpt domain-containing protein | CAY62_RS09270 | Not Available | Negative | 2027992 - 2028351 | 13275.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


