Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endolytic transglycosylase mltg | CAY62_RS08930 | Not Available | Negative | 1948866 - 1949879 | 37855.0 |
| aminodeoxychorismate lyase | CAY62_RS08935 | Not Available | Negative | 1949873 - 1950682 | 30423.8 |
| beta-ketoacyl-acp synthase ii | CAY62_RS08940 | Not Available | Negative | 1950816 - 1952054 | 42585.0 |
| acyl carrier protein | CAY62_RS08945 | Not Available | Negative | 1952139 - 1952375 | 8635.87 |
| 3-oxoacyl-acp reductase fabg | CAY62_RS08950 | Not Available | Negative | 1952534 - 1953268 | 25628.0 |
| acp s-malonyltransferase | CAY62_RS08955 | Not Available | Negative | 1953294 - 1954223 | 32409.1 |
| beta-ketoacyl-acp synthase iii | CAY62_RS08960 | Not Available | Negative | 1954355 - 1955311 | 33914.4 |
| phosphate acyltransferase plsx | CAY62_RS08965 | Not Available | Negative | 1955317 - 1956339 | 36673.1 |
| 50s ribosomal protein l32 | CAY62_RS08970 | Not Available | Negative | 1956352 - 1956522 | 6207.5 |
| 23s rrna accumulation protein yced | CAY62_RS08975 | Not Available | Negative | 1956545 - 1957063 | 19313.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


