Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CAY62_RS08830 | Not Available | Negative | 1927305 - 1927778 | 17950.3 |
| atp-binding protein | CAY62_RS08835 | Not Available | Negative | 1927788 - 1929116 | 48933.8 |
| slc13 family permease | CAY62_RS08840 | Not Available | Negative | 1929135 - 1930529 | 50313.9 |
| cbs domain-containing protein | CAY62_RS08845 | Not Available | Negative | 1930860 - 1931276 | 15454.9 |
| duf945 family protein | CAY62_RS08850 | Not Available | Negative | 1931455 - 1932768 | 47866.0 |
| amino acid abc transporter atp-binding protein | CAY62_RS08855 | Not Available | Positive | 1932946 - 1934379 | 53690.5 |
| response regulator | CAY62_RS08860 | Not Available | Positive | 1934376 - 1934876 | 18644.2 |
| 2-hydroxyacid dehydrogenase | CAY62_RS08865 | Not Available | Positive | 1935037 - 1936032 | 37190.6 |
| dna-binding transcriptional regulator dsdc | CAY62_RS08870 | Not Available | Negative | 1936051 - 1936983 | 35128.1 |
| tfox/sxy family dna transformation protein | CAY62_RS08875 | Not Available | Negative | 1937087 - 1937677 | 22507.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


