Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5 family transposase | CAY62_RS08490 | Not Available | Negative | 1838696 - 1839492 | 30126.2 |
| hypothetical protein | CAY62_RS08495 | Not Available | Positive | 1839648 - 1840376 | 27684.9 |
| hypothetical protein | CAY62_RS08500 | Not Available | Positive | 1840634 - 1841143 | 19197.1 |
| hypothetical protein | CAY62_RS08505 | Not Available | Positive | 1841276 - 1841908 | 24758.5 |
| hypothetical protein | CAY62_RS08510 | Not Available | Positive | 1841951 - 1842484 | 20798.8 |
| hypothetical protein | CAY62_RS08515 | Not Available | Positive | 1842994 - 1843566 | 21600.1 |
| hypothetical protein | CAY62_RS08520 | Not Available | Positive | 1843635 - 1843829 | 7330.7 |
| ygiq family radical sam protein | CAY62_RS08525 | Not Available | Positive | 1844334 - 1846673 | 87865.0 |
| phospholipase a | CAY62_RS08530 | Not Available | Positive | 1846830 - 1847822 | 38255.9 |
| hypothetical protein | CAY62_RS21545 | Not Available | Negative | 1847814 - 1847969 | 5535.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


