Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS08390 | Not Available | Negative | 1825565 - 1826239 | 24085.8 |
| duf1496 domain-containing protein | CAY62_RS08395 | Not Available | Negative | 1826381 - 1826656 | 10029.1 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | CAY62_RS08400 | Not Available | Positive | 1826919 - 1828580 | 61290.1 |
| glycerol-3-phosphate dehydrogenase subunit glpb | CAY62_RS08405 | Not Available | Positive | 1828577 - 1829899 | 48841.8 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit glpc | CAY62_RS08410 | Not Available | Positive | 1829896 - 1831107 | 45238.8 |
| amino acid abc transporter atp-binding protein | CAY62_RS08415 | Not Available | Negative | 1831193 - 1831660 | 16878.8 |
| lysr family transcriptional regulator | CAY62_RS08420 | Not Available | Positive | 1831719 - 1832594 | 33162.4 |
| anaerobic c4-dicarboxylate transporter dcuc | CAY62_RS08425 | Not Available | Positive | 1832917 - 1834284 | 47315.7 |
| Trna-asn | Not Available | Not Available | Positive | 1834506 - 1834581 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1834589 - 1834673 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


