Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS08290 | Not Available | Negative | 1806369 - 1806605 | 8601.37 |
| yeee/yede family protein | CAY62_RS08295 | Not Available | Negative | 1806686 - 1807120 | 15355.4 |
| yeee/yede family protein | CAY62_RS08300 | Not Available | Negative | 1807137 - 1807541 | 14172.0 |
| amino acid abc transporter atp-binding protein | CAY62_RS08305 | Not Available | Positive | 1807696 - 1808112 | 14986.8 |
| duf805 domain-containing protein | CAY62_RS08310 | Not Available | Negative | 1808191 - 1808580 | 14693.2 |
| hypothetical protein | CAY62_RS08315 | Not Available | Negative | 1808601 - 1808876 | 10669.0 |
| nupc/nupg family nucleoside cnt transporter | CAY62_RS08320 | Not Available | Negative | 1809040 - 1810263 | 42937.6 |
| lysr family transcriptional regulator | CAY62_RS08325 | Not Available | Negative | 1810652 - 1811572 | 34868.9 |
| methyl-accepting chemotaxis protein | CAY62_RS08330 | Not Available | Negative | 1811677 - 1813305 | 59335.4 |
| phosphate abc transporter substrate-binding protein | CAY62_RS08335 | Not Available | Positive | 1813699 - 1814520 | 28520.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


