Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | CAY62_RS08040 | Not Available | Positive | 1749684 - 1750562 | 33212.9 |
| marr family winged helix-turn-helix transcriptional regulator | CAY62_RS08045 | Not Available | Negative | 1750634 - 1751065 | 16464.3 |
| duf3861 domain-containing protein | CAY62_RS08050 | Not Available | Positive | 1751172 - 1751489 | 12112.6 |
| acetate uptake transporter | CAY62_RS08055 | Not Available | Negative | 1751571 - 1752158 | 20967.3 |
| iron-containing alcohol dehydrogenase | CAY62_RS08060 | Not Available | Negative | 1752652 - 1753842 | 42775.9 |
| grxa family glutaredoxin | CAY62_RS08065 | Not Available | Positive | 1754215 - 1754481 | 10032.0 |
| aspartate:alanine antiporter | CAY62_RS08070 | Not Available | Positive | 1754795 - 1756477 | 60499.1 |
| response regulator | CAY62_RS08075 | Not Available | Positive | 1756704 - 1757378 | 25504.8 |
| atp-binding protein | CAY62_RS08080 | Not Available | Positive | 1757388 - 1758734 | 50597.3 |
| enoyl-acp reductase fabv | CAY62_RS08085 | Not Available | Negative | 1758808 - 1760010 | 44160.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


