Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CAY62_RS21530 | Not Available | Positive | 1647453 - 1647629 | 6672.79 |
| alanine/glycine:cation symporter family protein | CAY62_RS07600 | Not Available | Positive | 1648421 - 1649911 | 53425.9 |
| peptidase t | CAY62_RS07605 | Not Available | Negative | 1650007 - 1651248 | 45683.1 |
| murr/rpir family transcriptional regulator | CAY62_RS07610 | Not Available | Negative | 1651306 - 1652163 | 32546.8 |
| hypothetical protein | CAY62_RS07615 | Not Available | Negative | 1652350 - 1652634 | 10720.0 |
| hypothetical protein | CAY62_RS07620 | Not Available | Positive | 1652859 - 1653251 | 14621.3 |
| hypothetical protein | CAY62_RS07625 | Not Available | Positive | 1653356 - 1653721 | 13446.0 |
| c4-dicarboxylate transporter dcuc | CAY62_RS07630 | Not Available | Negative | 1653869 - 1655224 | 47857.6 |
| sh3 domain-containing protein | CAY62_RS07635 | Not Available | Negative | 1655531 - 1656160 | 22760.1 |
| hypothetical protein | CAY62_RS07640 | Not Available | Negative | 1656363 - 1656830 | 17724.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


