Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-phosphofructokinase | CAY62_RS07500 | Not Available | Negative | 1623207 - 1624160 | 33838.4 |
| fused pts fructose transporter subunit iia/hpr protein | CAY62_RS07505 | Not Available | Negative | 1624161 - 1625279 | 39605.5 |
| catabolite repressor/activator | CAY62_RS07510 | Not Available | Positive | 1625816 - 1626796 | 36214.7 |
| putative pep-binding protein | CAY62_RS07515 | Not Available | Negative | 1626885 - 1627757 | 33292.6 |
| 3-deoxy-7-phosphoheptulonate synthase | CAY62_RS07520 | Not Available | Positive | 1628049 - 1629107 | 38392.1 |
| yajq family cyclic di-gmp-binding protein | CAY62_RS07525 | Not Available | Positive | 1629377 - 1629859 | 18092.5 |
| haaap family serine/threonine permease | CAY62_RS07530 | Not Available | Positive | 1630459 - 1631748 | 46257.0 |
| hypothetical protein | CAY62_RS07535 | Not Available | Negative | 1631817 - 1632632 | 30342.6 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | CAY62_RS07540 | Not Available | Negative | 1632786 - 1633712 | 35708.3 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | CAY62_RS07545 | Not Available | Negative | 1633960 - 1634892 | 36038.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


