Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain KC-Na-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium damselae subsp. damselae strain KC-Na-1 plasmid
Gene Summary
Adenine Count
24830 bp
Thymine Count
23536 bp
Guanine Count
16496 bp
Cytosine Count
16140 bp
Genome Length
81002 bp
Protein-coding Genes
81 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CAY62_RS07285 | Not Available | Negative | 1576547 - 1577467 | 34985.3 |
| gtp cyclohydrolase i fole | CAY62_RS07290 | Not Available | Negative | 1577574 - 1578227 | 24454.7 |
| molybdopterin molybdotransferase moea | CAY62_RS07295 | Not Available | Positive | 1578522 - 1579757 | 44195.0 |
| molybdopterin-synthase adenylyltransferase moeb | CAY62_RS07300 | Not Available | Positive | 1579770 - 1580528 | 27522.6 |
| nupc/nupg family nucleoside cnt transporter | CAY62_RS07305 | Not Available | Negative | 1580707 - 1581915 | 42028.2 |
| s1 rna-binding domain-containing protein | CAY62_RS07310 | Not Available | Negative | 1582253 - 1583095 | 31265.9 |
| hypothetical protein | CAY62_RS07315 | Not Available | Positive | 1583453 - 1584817 | 53544.3 |
| lysr substrate-binding domain-containing protein | CAY62_RS07320 | Not Available | Positive | 1584849 - 1585775 | 36108.6 |
| amino acid abc transporter atp-binding protein | CAY62_RS22250 | Not Available | Positive | 1585902 - 1586511 | 23329.8 |
| sodium/sugar symporter | CAY62_RS07335 | Not Available | Positive | 1587304 - 1588935 | 58716.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


